👋 Welcome to BioF3's Paper Digest! Today's edition features 0 GitHub projects and 4 research papers from bioRxiv, arXiv, and PubMed.
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1. A recipe for scalable attention-based MLIPs: unlocking long-range accuracy with all-to-all node attention
📄 arXiv Paper | Date:
2026-03-06| Category:q-bio.QM
Authors: Eric Qu, Brandon M. Wood, Aditi S. Krishnapriyan et al.
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Machine-learning interatomic potentials (MLIPs) have advanced rapidly, with many top models relying on strong physics-based inductive biases. However, as models scale to larger systems like biomolecules and electrolytes, they struggle to accurately capture long-range (LR) interactions, leading curre...
2. Sampling-based Continuous Optimization for Messenger RNA Design
📄 arXiv Paper | Date:
2026-03-06| Category:q-bio.BM
Authors: Feipeng Yue, Ning Dai, Wei Yu Tang et al.
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Designing messenger RNA (mRNA) sequences for a fixed target protein requires searching an exponentially large synonymous space while optimizing properties that affect stability and downstream performance. This is challenging because practical mRNA design involves multiple coupled objectives beyond c...
3. Taurochenodeoxycholic acid alleviates obesity-induced endothelial dysfunction.
📄 PubMed Article | Date:
2026 Mar 9| Category:European heart journal
Authors: Lu H, Wu Z, Wan M et al.
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Taurochenodeoxycholic acid alleviates obesity-induced endothelial dysfunction....
4. Long-term prognosis of lean MASLD: evidence from three population-based prospective cohorts.
📄 PubMed Article | Date:
2026 Mar 6| Category:Gut
Authors: Huo Z, Chen Y, Huang Y et al.
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Long-term prognosis of lean MASLD: evidence from three population-based prospective cohorts....
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